Package: gamlss.ggplots 2.1-15

Mikis Stasinopoulos

gamlss.ggplots: Plotting Functions for Generalized Additive Model for Location Scale and Shape

Functions for plotting Generalized Additive Models for Location Scale and Shape from the 'gamlss' package, Stasinopoulos and Rigby (2007) <doi:10.18637/jss.v023.i07>, using the graphical methods from 'ggplot2'.

Authors:Mikis Stasinopoulos [aut, cre, cph], Robert Rigby [aut], Fernanda De Bastiani [aut], Julian Merder [ctb]

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NEWS

# Install 'gamlss.ggplots' in R:
install.packages('gamlss.ggplots', repos = c('https://gamlss-dev.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/gamlss-dev/gamlss.ggplots/issues

On CRAN:

74 exports 1 stars 6.31 score 47 dependencies 113 mentions 9 scripts 266 downloads

Last updated 2 months agofrom:10ff8ea0ce. Checks:OK: 5 NOTE: 2. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 08 2024
R-4.5-winNOTESep 08 2024
R-4.5-linuxNOTESep 08 2024
R-4.4-winOKSep 08 2024
R-4.4-macOKSep 08 2024
R-4.3-winOKSep 08 2024
R-4.3-macOKSep 08 2024

Exports:ACEadd_resid_qqplotboot_coefboot_coef_onecentile_bucketcentile_bucket_wrapcentile_colour_bothcentile_colour_halfcentile_gray_bothfamily_cdffamily_pdffit_PBfitted_cdffitted_cdf_datafitted_centilesfitted_centiles_legendfitted_devianceIncrfitted_leveragefitted_pdffitted_pdf_datafitted_termshistSmo_plotmcormodel_centilesmodel_densitymodel_devianceIncr_diffmodel_GAICmodel_GAIC_lollipopmodel_mom_bucketmodel_pcamodel_qqplotmodel_wpmodel_wp_wrapmoment_bucketmoment_bucket_wrapmoment_colour_bothmoment_colour_halfmoment_gray_bothmoment_gray_halfpcr_coef_pathpcr_pathpe_1_parampe_2_parampe_parampe_param_gridpe_pdfpe_pdf_gridpredict_cdfpredict_pdfprof_termquantile_gamlssresid_densityresid_dtopresid_ecdfresid_indexresid_medianresid_muresid_paramresid_plotsresid_qqplotresid_quantileresid_symmetryresid_wpresid_wp_wrapresid_xvarresp_muresp_paramresp_quantiley_acfy_dotsy_ecdfy_histy_pacfy_symmetry

Dependencies:clicodetoolscolorspacedoParallelellipsefansifarverforeachFormulagamlssgamlss.datagamlss.distgamlss.foreachgamlss.infgamlss2ggplot2ggridgesglmnetgluegtableisobanditeratorslabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerRcppRcppEigenrlangscalesshapesurvivaltibbleutf8vctrsviridisLitewithryaImpute

Readme and manuals

Help Manual

Help pageTopics
Plotting Functions for Generalized Additive Model for Location Scale and Shapegamlss.ggplots-package gamlss.ggplots
Alternating Conditional ExpectationsACE mcor
Plotting Bootstrap Coefficientsboot_coef boot_coef_one
Centile bucket plotcentile_bucket centile_bucket_wrap model_cent_bucket
Plotting Probabilities Density Functions (pdf's) for GAMLSSfamily_pdf fitted_pdf fitted_pdf_data predict_pdf
P-spline smootherfit_PB
Plotting Cumulative Distribution Functions (cdf's) for GAMLSS,family_cdf fitted_cdf fitted_cdf_data predict_cdf
Plotting centile (growth) curvesfitted_centiles fitted_centiles_legend model_centiles
Plotting the deviance increment of GAMLSSfitted_devianceIncr model_devianceIncr_diff
Plot of the linear leverage of a GAMLSS modelfitted_leverage
Plotting fitted additive termsfitted_terms pe_terms
Supporting histSmo()histSmo_plot
Plotting GAIC for GAMLSS modelsmodel_GAIC model_GAIC_lollipop
Plotting residuals using PCAmodel_pca
Moment bucket plotmodel_mom_bucket moment_bucket moment_bucket_wrap
Functions to create the background for the bucket plotscentile_colour_both centile_colour_half centile_gray_both moment_colour_both moment_colour_half moment_gray_both moment_gray_half
Plotting the fitted path of a PCR model.pcr_coef_path pcr_path
Partial Effect of a term on the parameters and predictorspe_1_param pe_2_param pe_param pe_param_grid
Partial Effect of a term on the response distributionpe_pdf pe_pdf_grid
Plotting the profile deviance of one fitted termprof_term
Density of the residuals in a GAMLLSS modelmodel_density resid_density
Detrended Transformed Owen's Plot and ECDF for the residualsresid_dtop resid_ecdf y_ecdf
A residual plotsresid_index resid_median resid_mu resid_param resid_plots resid_quantile resid_xvar
QQ-plot of the residuals of a GAMLSS modeladd_resid_qqplot model_qqplot resid_qqplot
Symmetry plotsresid_symmetry y_symmetry
Worm plot using ggplot2model_wp model_wp_wrap resid_wp resid_wp_wrap
Plotting the response against quantities of the fitted modelquantile_gamlss resp_mu resp_param resp_quantile
Histogram and density plot.y_acf y_dots y_hist y_pacf