Package: gamlss.ggplots 2.1-34

Mikis Stasinopoulos

gamlss.ggplots: Plotting Functions for Generalized Additive Model for Location Scale and Shape

Functions for plotting Generalized Additive Models for Location Scale and Shape from the 'gamlss' package, Stasinopoulos and Rigby (2007) <doi:10.18637/jss.v023.i07>, using the graphical methods from 'ggplot2'.

Authors:Mikis Stasinopoulos [aut, cre, cph], Robert Rigby [aut], Fernanda De Bastiani [aut], Julian Merder [ctb]

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manual.pdf |manual.html
card.svg |card.png
gamlss.ggplots/json (API)
NEWS

# Install 'gamlss.ggplots' in R:
install.packages('gamlss.ggplots', repos = c('https://gamlss-dev.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/gamlss-dev/gamlss.ggplots/issues

On CRAN:

Conda:

5.44 score 2 stars 1 packages 51 scripts 36 downloads 113 mentions 109 exports 89 dependencies

Last updated from:0d38330ace. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK232
source / vignettesOK217
linux-release-x86_64OK224
macos-release-arm64OK162
macos-oldrel-arm64OK176
windows-develOK181
windows-releaseOK189
windows-oldrelOK245
wasm-releaseOK131

Exports:add_resid_qqplotbivar_funbivar_fun_plotlybivar_pdfbivar.fun.contourbivar.fun.imagebivar.fun.perspboot_coefboot_coef_onecentile_bucketcentile_bucket_wrapcentile_colour_bothcentile_colour_halfcentile_gray_bothECDF_2Dfamily_cdffamily_pdffit_PBfitted_cdffitted_cdf_datafitted_centilesfitted_centiles_gapfitted_centiles_legendfitted_devianceIncrfitted_leveragefitted_pdffitted_pdf_datafitted_survivalfitted_survival_datafitted_termshistSmo_plotmedian_cwmedian_pcmedian_spmodel_centilesmodel_densitymodel_devianceIncr_diffmodel_GAICmodel_GAIC_lollipopmodel_mom_bucketmodel_pcamodel_qqplotmodel_TDmodel_TD_lollipopmodel_wpmodel_wp_wrapmoment_bucketmoment_bucket_wrapmoment_colour_bothmoment_colour_halfmoment_gray_bothmoment_gray_halfpcr_coef_pathpcr_pathpe_1_parameterpe_2_parameterpe_etape_eta_gridpe_parampe_param_gridpe_pdfpe_pdf_gridpe_termspredict_cdfpredict_pdfprof_termquantile_gamlssresid_densityresid_dtopresid_ecdfresid_indexresid_medianresid_muresid_paramresid_plotsresid_qqplotresid_quantileresid_symmetryresid_wpresid_wp_wrapresid_xvarresp_muresp_paramresp_quantilexy_densityxy_density_plainxy_ECDF_contourxy_ECDF_histxy_histxy_hist_kde2dxy_medianxy_pit_densityxy_pit_histxy_pit_scatterxy_scatterxy.density.contourxy.density.imagexy.density.perspxy.ECDF.contourxy.ECDF.imagexy.ECDF.perspy_acfy_dotsy_ecdfy_epdfy_epity_histy_pacfy_symmetry

Dependencies:askpassbase64encbslibcachemclicodetoolscpp11crosstalkcurldata.tabledigestdistributions3doParalleldplyrellipseevaluatefarverfastmapfontawesomeforeachFormulafsgamlssgamlss.datagamlss.distgamlss.foreachgamlss.infgamlss2genericsggplot2ggridgesglmnetgluegtablehighrhtmltoolshtmlwidgetshttrisobanditeratorsjquerylibjsonliteknitrlabelinglaterlatticelazyevallifecyclemagrittrMASSMatrixmemoisemgcvmimemvtnormnlmeopensslotelpillarpkgconfigplotlypromisespurrrR6rappdirsRColorBrewerRcppRcppEigenrlangrmarkdownS7sassscalesshapestringistringrsurvivalsystibbletidyrtidyselecttinytexutf8vctrsviridisLitewithrxfunyaImputeyaml

Readme and manuals

Help Manual

Help pageTopics
Plotting Functions for Generalized Additive Model for Location Scale and Shapegamlss.ggplots-package gamlss.ggplots
Function to Plot Two Dimensinal Functionsbivar.fun.contour bivar.fun.image bivar.fun.persp bivar_fun bivar_fun_plotly bivar_pdf
Plotting Bootstrap Coefficientsboot_coef boot_coef_one
Centile bucket plotcentile_bucket centile_bucket_wrap model_cent_bucket
Plotting Probabilities Density Functions (pdf's) for GAMLSSfamily_pdf fitted_pdf fitted_pdf_data predict_pdf
P-spline smootherfit_PB
Plotting Cumulative Distribution Functions (cdf's) for GAMLSS,family_cdf fitted_cdf fitted_cdf_data fitted_survival fitted_survival_data predict_cdf
Plotting centile (growth) curvesfitted_centiles fitted_centiles_gap fitted_centiles_legend model_centiles
Plotting the deviance increment of GAMLSSfitted_devianceIncr model_devianceIncr_diff
Plot of the linear leverage of a GAMLSS modelfitted_leverage
Plotting fitted additive termsfitted_terms pe_terms
Supporting histSmo()histSmo_plot
Plotting GAIC for GAMLSS modelsmodel_GAIC model_GAIC_lollipop model_TD model_TD_lollipop
Plotting residuals using PCAmodel_pca
Moment bucket plotmodel_mom_bucket moment_bucket moment_bucket_wrap
Functions to create the background for the bucket plotscentile_colour_both centile_colour_half centile_gray_both moment_colour_both moment_colour_half moment_gray_both moment_gray_half
Plotting the fitted path of a PCR model.pcr_coef_path pcr_path
Partial Effect of a Term IN a Parameters OR Predictorpe_1_parameter pe_2_parameter pe_eta pe_eta_grid pe_param pe_param_grid
Partial Effect of a term on the response distributionpe_pdf pe_pdf_grid
Plotting the profile deviance of one fitted termprof_term
Density of the residuals in a GAMLLSS modelmodel_density resid_density
Detrended Transformed Owen's Plot and ECDF for the residualsresid_dtop resid_ecdf y_ecdf y_epdf y_epit
Residual plotsresid_index resid_median resid_mu resid_param resid_plots resid_quantile resid_xvar
QQ-plot of the residuals of a GAMLSS modeladd_resid_qqplot model_qqplot resid_qqplot
Symmetry plotsresid_symmetry y_symmetry
Worm plot using ggplot2model_wp model_wp_wrap resid_wp resid_wp_wrap
Plotting the response against quantities of the fitted modelquantile_gamlss resp_mu resp_param resp_quantile
The Median in Two Dimensionsmedian_cw median_pc median_sp xy_median
Data Plot for Bivariate VectorsECDF_2D xy.density.contour xy.density.image xy.density.persp xy.ECDF.contour xy.ECDF.image xy.ECDF.persp xy_density xy_density_plain xy_ECDF_contour xy_ECDF_hist xy_hist xy_hist_kde2d xy_pit_density xy_pit_hist xy_pit_scatter xy_scatter
Histogram and density plot.y_acf y_dots y_hist y_pacf